BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB020A06LP1|AL427555
(827 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1367 1539 0.0
>3x_Contig1367
Length = 7312
Score = 1539 bits (773), Expect = 0.0
Identities = 801/813 (98%)
Strand = Plus / Minus
Query: 15 tctctctttctaacgtctttttatcctattgcctttagtttctaactaacttctcctttt 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7104 tctctctttctaacgtctttttatcctattgcctttagtttctaactaacttctcctttt 7045
Query: 75 aactaatttgtcttgtcttcacgtcttgcactatccaaatcgttatctatatgtgaatga 134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7044 aactaatttgtcttgtcttcacgtcttgcactatccaaatcgttatctatatgtgaatga 6985
Query: 135 cttaaggggacaaaggattaatcagcttttttcttttttcctctttggtctttttttttt 194
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6984 cttaaggggacaaaggattaatcagcttttttcttttttcctctttggtctttttttttt 6925
Query: 195 atctttcctactgtattaaaaagatcaaacacaagcttacaaaaactaacaataatacgt 254
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 6924 atctttcctactgtattacaaagatcaaacacaagcttacaaaaactaacaataatacgt 6865
Query: 255 atatacacatataagtaattattaatkatatatatayattgggcatataaagtgaaaaac 314
|||||||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||
Sbjct: 6864 atatacacatatcagtaattattaatgatatatatacattgggcatataaagtgaaaaac 6805
Query: 315 gtgcaactaaatgtttctcataaacaatgggaattagcaggatacttttatactgcatgg 374
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6804 gtgcaactaaatgtttctcataaacaatgggaattagcaggatacttttatactgcatgg 6745
Query: 375 ttgatcgtatcaggcacatcaattcaacattagctcaacatcaggacacatttccaatgc 434
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6744 ttgatcgtatcaggcacatcaattcaacattagctcaacatcaggacacatttccaatgc 6685
Query: 435 tttgatctaagcctaatagttgttattgacgaaaccattactcttacttttcctgtatag 494
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 6684 tttgatctaagcctaatagttgtcattgacgaaaccattactcttacttttcctgtatag 6625
Query: 495 ctgttatctttacgctttttgttcttgatttttccatagtaactgatggatttttcttag 554
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6624 ctgtcatctttacgctttttgttcttgatttttccatagtaactgatggatttttcttag 6565
Query: 555 tttcattcaacagaagttatatattatacgaagcgtgacagaaagctgtgacaaaggtta 614
||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 6564 tttcattcaacagaagtgatatcttatacgaagcgtgacagaaagctgtcacaaaggtta 6505
Query: 615 ggaattacagagttaattgagagcattttccttttttttcttcttccgttgagactacga 674
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6504 ggaattacagagtcaattgagagcattttccttttttttcttcttccgttgagactacga 6445
Query: 675 atttacgttgagactttgatagggttcggcctgttgagagatttgtaagtwataacgagg 734
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 6444 atttacgttgagactttgatagggttcggcctgttgagagatttgtaagtaataacgagg 6385
Query: 735 cttaatatttttagttaacatttttcttgtatgcaggtaaggcttacaaagaccasgtca 794
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 6384 cttaatatttttagttaacatttttcttgtatgcaggtaaggcttacaaagaccaggtca 6325
Query: 795 ttttttttttttttttttttggtttatttttgg 827
|||||||||||||||||||||||||||||||||
Sbjct: 6324 ttttttttttttttttttttggtttatttttgg 6292
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 24,111
Number of Sequences: 1807
Number of extensions: 24111
Number of successful extensions: 4152
Number of sequences better than 1.0e-20: 1
length of query: 827
length of database: 10,358,551
effective HSP length: 16
effective length of query: 811
effective length of database: 10,329,639
effective search space: 8377337229
effective search space used: 8377337229
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)